Transcript: ENSCAFT00000004271.5 COL12A1-203

Description

collagen type XII alpha 1 chain [Source:VGNC Symbol;Acc:VGNC:39458]

Location

About this transcript

This transcript has 65 exons, is annotated with 157 domains and features, is associated with 1531 variant alleles and maps to 14 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSCAFT00000049283.4	COL12A1-202	9329	3063aa	ENSCAFP00000041242.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8P0NS68	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSCAFT00000004271.5	COL12A1-203	9101	2987aa	ENSCAFP00000003954.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8P0N5P0	-
ENSCAFT00000061257.2	COL12A1-201	5852	1874aa	ENSCAFP00000057089.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8P0T967	-
ENSCAFT00000080483.2	COL12A1-204	5837	1899aa	ENSCAFP00000046331.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8P0SZI3	-

Summary

Statistics

Exons: 65, Coding exons: 65, Transcript length: 9,101 bps, Translation length: 2,987 residues

Version

ENSCAFT00000004271.5

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Frameshift introns

Frameshift introns occur at intron number(s) 29.