Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: COL17A1 ENSCAFG00845028642

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Description

collagen type XVII alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2194]

Location

Primary_assembly 28: 16,828,097-16,880,431 reverse strand.

ROS_Cfam_1.0:CM025127.1

About this gene

This gene has 4 transcripts (splice variants), 98 orthologues and 34 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSCAFT00845050837.1	COL17A1-201	5703	1597aa	ENSCAFP00845039852.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C0TU41 A0A8I3PYM6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSCAFT00845051610.1	COL17A1-204	5407	1547aa	ENSCAFP00845040495.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C0TPZ1 A0A8I3SC42	-
ENSCAFT00845050895.1	COL17A1-202	5198	1442aa	ENSCAFP00845039900.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I3PYR5	-
ENSCAFT00845051101.1	COL17A1-203	5132	1420aa	ENSCAFP00845040066.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I3Q1Z9	-

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Summary

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