Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: VPS54 ENSCAFG00845019815

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Description

VPS54 subunit of GARP complex [Source:HGNC Symbol;Acc:HGNC:18652]

Location

Primary_assembly 10: 64,608,155-64,683,345 reverse strand.

ROS_Cfam_1.0:CM025109.1

About this gene

This gene has 4 transcripts (splice variants) and 205 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSCAFT00845035084.1	VPS54-204	3572	977aa	ENSCAFP00845027465.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I3P024	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSCAFT00845035286.1	VPS54-201	3544	965aa	ENSCAFP00845027620.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C0NZZ0 A0A8I3PB93	-
ENSCAFT00845035407.1	VPS54-202	3436	929aa	ENSCAFP00845027717.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C0NK33 A0A8I3P0M1	-
ENSCAFT00845035630.1	VPS54-203	3391	914aa	ENSCAFP00845027874.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I3P7U9	-

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Summary

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