Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
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Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
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External references
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ID History
- Gene history

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Gene: CIITA ENSCAFG00000018931

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Description

class II major histocompatibility complex transactivator [Source:VGNC Symbol;Acc:VGNC:39273]

Location

Primary_assembly 6: 33,156,962-33,219,466 reverse strand.

Dog10K_Boxer_Tasha:CM000006.4

About this gene

This gene has 6 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSCAFT00000076376.2	CIITA-204	4623	1206aa	ENSCAFP00000057984.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C0RXN3 A0A8P0TA14	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSCAFT00000073438.2	CIITA-205	4578	1191aa	ENSCAFP00000047482.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C0RXY6 A0A8P0NXK4	-
ENSCAFT00000070742.2	CIITA-206	4560	1185aa	ENSCAFP00000049836.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8P0NZP9	-
ENSCAFT00000030075.6	CIITA-201	4337	1122aa	ENSCAFP00000027952.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8P0NK05	-
ENSCAFT00000030069.5	CIITA-202	4096	1128aa	ENSCAFP00000027946.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C0N1W1 A0A8I3NQ77	-
ENSCAFT00000061328.2	CIITA-203	3865	1051aa	ENSCAFP00000053429.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8P0P320	-

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Summary

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