Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: COL17A1 ENSCAFG00000010547

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Description

collagen type XVII alpha 1 chain [Source:VGNC Symbol;Acc:VGNC:39462]

Location

Primary_assembly 28: 16,522,798-16,574,877 reverse strand.

Dog10K_Boxer_Tasha:CM000028.4

About this gene

This gene has 7 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSCAFT00000045026.4	COL17A1-207	5703	1597aa	ENSCAFP00000037321.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C0TU41 A0A8I3PYM6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSCAFT00000072382.2	COL17A1-201	5407	1547aa	ENSCAFP00000057779.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C0TPZ1 A0A8I3SC42	-
ENSCAFT00000089841.2	COL17A1-202	5234	1454aa	ENSCAFP00000062164.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8P0TE04	-
ENSCAFT00000005111.6	COL17A1-203	5198	1442aa	ENSCAFP00000004737.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I3PYR5 A0A8P0N645	-
ENSCAFT00000016764.5	COL17A1-204	5168	1432aa	ENSCAFP00000015514.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8P0NCT3	-
ENSCAFT00000109567.1	COL17A1-205	5132	1420aa	ENSCAFP00000073037.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8P0TRX8	-
ENSCAFT00000105256.1	COL17A1-206	5123	1417aa	ENSCAFP00000075249.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8P0TUR0	-

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Summary

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