Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Gene: COL9A1 ENSCAFG00000002589

Description

collagen type IX alpha 1 chain [Source:VGNC Symbol;Acc:VGNC:49782]

Location

Dog10K_Boxer_Tasha:CM000012.4

About this gene

This gene has 3 transcripts (splice variants).

Transcripts

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSCAFT00000004081.5	COL9A1-202	2995	921aa	ENSCAFP00000003773.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C0RYK6 A0A8I3NL86	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSCAFT00000086734.2	COL9A1-201	2380	680aa	ENSCAFP00000059530.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C0RYB6 A0A8I3N625	-
ENSCAFT00000065607.2	COL9A1-203	987	328aa	ENSCAFP00000065606.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C0P8R6 A0A8I3N718	-

Summary