Transcript: ENSBTAT00000085132.2 PDZD4-201

Description

PDZ domain containing 4 [Source:VGNC Symbol;Acc:VGNC:32727]

Location

Primary_assembly X: 37,019,117-37,045,672 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 22 domains and features and is associated with 1448 variant alleles.

Gene

This transcript is a product of gene ENSBTAG00000021422.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000126318.1	PDZD4-202	2744	794aa	ENSBTAP00000088279.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000028557.7	PDZD4-203	2705	781aa	ENSBTAP00000028557.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MWQ6	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000085132.2	PDZD4-201	2161	666aa	ENSBTAP00000071403.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MBE7	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 2,161 bps, Translation length: 666 residues

Version

ENSBTAT00000085132.2

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSBTAT00000085132.2 PDZD4-201

Summary

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Transcript: ENSBTAT00000085132.2 PDZD4-201

Summary

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