Transcript: ENSBTAT00000066170.2 TSC22D3-204

Description

TSC22 domain family member 3 [Source:VGNC Symbol;Acc:VGNC:112679]

Location

Primary_assembly X: 56,329,804-56,395,999 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 14 domains and features, is associated with 1581 variant alleles and maps to 12 oligo probes.

Gene

This transcript is a product of gene ENSBTAG00000045877.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000083805.2	TSC22D3-205	2657	360aa	ENSBTAP00000071042.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MAJ3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000124065.1	TSC22D3-206	2370	267aa	ENSBTAP00000077651.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9RW60	-
ENSBTAT00000084046.2	TSC22D3-207	2162	246aa	ENSBTAP00000070865.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MJC0	-
ENSBTAT00000066170.2	TSC22D3-204	2147	200aa	ENSBTAP00000054509.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6QNK4	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000119318.2	TSC22D3-203	2003	194aa	ENSBTAP00000082040.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SEK7	-
ENSBTAT00000074359.2	TSC22D3-201	1979	134aa	ENSBTAP00000072060.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MQL5	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000067753.1	TSC22D3-202	1830	110aa	ENSBTAP00000059702.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6QNR8	-

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 2,147 bps, Translation length: 200 residues

Version

ENSBTAT00000066170.2

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

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Transcript: ENSBTAT00000066170.2 TSC22D3-204

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Transcript: ENSBTAT00000066170.2 TSC22D3-204

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