Transcript: ENSBTAT00000066052.3 PHRF1-201

Description

PHD and ring finger domains 1 [Source:VGNC Symbol;Acc:VGNC:32847]

Location

About this transcript

This transcript has 18 exons, is annotated with 63 domains and features, is associated with 4919 variant alleles and maps to 12 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000125154.1	PHRF1-202	5147	1624aa	ENSBTAP00000098258.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TIG1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000066052.3	PHRF1-201	5327	1615aa	ENSBTAP00000056140.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G3N2M4	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 18, Coding exons: 17, Transcript length: 5,327 bps, Translation length: 1,615 residues

Version

ENSBTAT00000066052.3

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.