Transcript: ENSBTAT00000065568.3 CACNA1S-203

Description

calcium voltage-gated channel subunit alpha1 S [Source:VGNC Symbol;Acc:VGNC:59326]

Location

Primary_assembly 16: 79,602,017-79,658,453 reverse strand.

About this transcript

This transcript has 43 exons, is annotated with 117 domains and features, is associated with 6534 variant alleles and maps to 9 oligo probes.

Gene

This transcript is a product of gene ENSBTAG00000047491.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000065901.3	CACNA1S-201	5706	1872aa	ENSBTAP00000054797.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G3MZ07	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000069318.2	CACNA1S-202	5646	1852aa	ENSBTAP00000067622.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1N931	-
ENSBTAT00000065568.3	CACNA1S-203	5604	1853aa	ENSBTAP00000056589.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G3N3S8	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 43, Coding exons: 43, Transcript length: 5,604 bps, Translation length: 1,853 residues

Version

ENSBTAT00000065568.3

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSBTAT00000065568.3 CACNA1S-203

Summary

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Transcript: ENSBTAT00000065568.3 CACNA1S-203

Summary

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