Transcript: ENSBTAT00000064585.3 SP2-204

Description

Sp2 transcription factor [Source:VGNC Symbol;Acc:VGNC:35153]

Location

Primary_assembly 19: 38,533,720-38,565,125 reverse strand.

About this transcript

This transcript has 8 exons, is annotated with 39 domains and features, is associated with 1811 variant alleles and maps to 10 oligo probes.

Gene

This transcript is a product of gene ENSBTAG00000013740.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000097132.1	SP2-202	2773	668aa	ENSBTAP00000078844.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9S4T0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000120358.1	SP2-201	2822	635aa	ENSBTAP00000079850.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9S416	-
ENSBTAT00000100095.1	SP2-203	2758	630aa	ENSBTAP00000097605.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TH88	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000064585.3	SP2-204	2729	588aa	ENSBTAP00000054632.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A452DJJ4	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000127782.1	SP2-205	2526	586aa	ENSBTAP00000081212.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9S5L6	-

Summary

Statistics

Exons: 8, Coding exons: 6, Transcript length: 2,729 bps, Translation length: 588 residues

Version

ENSBTAT00000064585.3

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

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Transcript: ENSBTAT00000064585.3 SP2-204

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Transcript: ENSBTAT00000064585.3 SP2-204

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