Transcript: ENSBTAT00000061369.5 TNRC6C-205

Description

trinucleotide repeat containing adaptor 6C [Source:VGNC Symbol;Acc:VGNC:36206]

Location

Primary_assembly 19: 54,051,416-54,091,251 reverse strand.

About this transcript

This transcript has 17 exons, is annotated with 64 domains and features, is associated with 4844 variant alleles and maps to 22 oligo probes.

Gene

This transcript is a product of gene ENSBTAG00000018658.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000102537.1	TNRC6C-201	6888	1895aa	ENSBTAP00000088968.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SXM1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000118274.1	TNRC6C-202	6789	1862aa	ENSBTAP00000098023.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TIA1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000077012.2	TNRC6C-203	6266	1870aa	ENSBTAP00000067592.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1N906	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000081636.2	TNRC6C-204	6165	1867aa	ENSBTAP00000063742.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M629	-
ENSBTAT00000061369.5	TNRC6C-205	5542	1679aa	ENSBTAP00000053234.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MLT5	-

Summary

Statistics

Exons: 17, Coding exons: 17, Transcript length: 5,542 bps, Translation length: 1,679 residues

Version

ENSBTAT00000061369.5

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

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Transcript: ENSBTAT00000061369.5 TNRC6C-205

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Transcript: ENSBTAT00000061369.5 TNRC6C-205

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