Transcript: ENSBTAT00000061241.4 SHOC1-202

Description

shortage in chiasmata 1 [Source:VGNC Symbol;Acc:VGNC:52743]

Gene Synonyms

C8H9ORF84

Location

About this transcript

This transcript has 14 exons, is annotated with 3 domains and features and is associated with 1273 variant alleles.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000087036.2	SHOC1-201	5047	1546aa	ENSBTAP00000073375.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MPI5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000061241.4	SHOC1-202	1600	484aa	ENSBTAP00000053472.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MMQ3	-

Summary

Statistics

Exons: 14, Coding exons: 12, Transcript length: 1,600 bps, Translation length: 484 residues

Version

ENSBTAT00000061241.4

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Frameshift introns

Frameshift introns occur at intron number(s) 13.