Transcript: ENSBTAT00000061134.3 LPP-203

Description

LIM domain containing preferred translocation partner in lipoma [Source:NCBI gene (formerly Entrezgene);Acc:524132]

Location

Primary_assembly 1: 78,452,386-79,136,219 reverse strand.

About this transcript

This transcript has 12 exons, is annotated with 40 domains and features and is associated with 20566 variant alleles.

Gene

This transcript is a product of gene ENSBTAG00000044001.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000093766.1	LPP-201	2290	632aa	ENSBTAP00000103332.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9U1Y4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000061134.3	LPP-203	2463	614aa	ENSBTAP00000053242.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BMD6	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000070743.2	LPP-202	2127	556aa	ENSBTAP00000072067.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1NJ09	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 12, Coding exons: 9, Transcript length: 2,463 bps, Translation length: 614 residues

Version

ENSBTAT00000061134.3

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSBTAT00000061134.3 LPP-203

Summary

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Transcript: ENSBTAT00000061134.3 LPP-203

Summary

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