Transcript: ENSBTAT00000061092.4 MAP3K12-202

Description

mitogen-activated protein kinase kinase kinase 12 [Source:VGNC Symbol;Acc:VGNC:31190]

Location

Primary_assembly 5: 26,526,028-26,540,451 forward strand.

About this transcript

This transcript has 16 exons, is annotated with 38 domains and features, is associated with 1987 variant alleles and maps to 32 oligo probes.

Gene

This transcript is a product of gene ENSBTAG00000020758.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000125133.1	MAP3K12-203	3603	918aa	ENSBTAP00000087671.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SMT9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000061092.4	MAP3K12-202	3597	916aa	ENSBTAP00000053643.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1N791	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000079491.2	MAP3K12-204	3504	885aa	ENSBTAP00000066288.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LZJ9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000128639.2	MAP3K12-201	3421	893aa	ENSBTAP00000085949.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SSF2	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

Summary

Statistics

Exons: 16, Coding exons: 14, Transcript length: 3,597 bps, Translation length: 916 residues

Version

ENSBTAT00000061092.4

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

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Transcript: ENSBTAT00000061092.4 MAP3K12-202

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Transcript: ENSBTAT00000061092.4 MAP3K12-202

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