Transcript: ENSBTAT00000044128.5 SH3GLB1-203

Description

SH3 domain containing GRB2 like, endophilin B1 [Source:VGNC Symbol;Acc:VGNC:34575]

Location

Primary_assembly 3: 57,269,358-57,314,453 reverse strand.

About this transcript

This transcript has 11 exons, is annotated with 15 domains and features, is associated with 2290 variant alleles and maps to 10 oligo probes.

Gene

This transcript is a product of gene ENSBTAG00000031171.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000081144.2	SH3GLB1-202	1687	394aa	ENSBTAP00000069535.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1NDH3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000124387.1	SH3GLB1-201	2288	376aa	ENSBTAP00000102710.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TVR9	-
ENSBTAT00000044128.5	SH3GLB1-203	1663	386aa	ENSBTAP00000041643.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAF6ZET2	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 1,663 bps, Translation length: 386 residues

Version

ENSBTAT00000044128.5

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSBTAT00000044128.5 SH3GLB1-203

Summary

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Transcript: ENSBTAT00000044128.5 SH3GLB1-203

Summary

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