Transcript: ENSBTAT00000037077.7 CAST-202

Description

calpastatin [Source:VGNC Symbol;Acc:VGNC:26790]

Location

Primary_assembly 7: 96,034,223-96,167,151 forward strand.

About this transcript

This transcript has 30 exons, is annotated with 41 domains and features, is associated with 8152 variant alleles and maps to 22 oligo probes.

Gene

This transcript is a product of gene ENSBTAG00000000874.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000071010.3	CAST-208	4703	848aa	ENSBTAP00000058598.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LI46	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000065978.4	CAST-203	4958	799aa	ENSBTAP00000056154.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G3N2N7	-
ENSBTAT00000037077.7	CAST-202	4952	797aa	ENSBTAP00000036917.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MR96	-
ENSBTAT00000110447.2	CAST-209	4932	741aa	ENSBTAP00000086507.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9STT2	-
ENSBTAT00000027864.8	CAST-201	4910	783aa	ENSBTAP00000027864.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MD74	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000079894.3	CAST-210	4745	704aa	ENSBTAP00000057302.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LLB2	-
ENSBTAT00000087389.3	CAST-205	4706	712aa	ENSBTAP00000065716.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M6S3	-
ENSBTAT00000076275.3	CAST-207	4664	835aa	ENSBTAP00000058259.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LT32	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000067827.3	CAST-204	4613	749aa	ENSBTAP00000061529.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MZC5	-
ENSBTAT00000011029.7	CAST-206	4569	786aa	ENSBTAP00000011029.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1N161	-

Summary

Statistics

Exons: 30, Coding exons: 29, Transcript length: 4,952 bps, Translation length: 797 residues

Version

ENSBTAT00000037077.7

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSBTAT00000037077.7 CAST-202

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Transcript: ENSBTAT00000037077.7 CAST-202

Summary

About Us

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