Transcript: ENSBTAT00000037034.7 CCR6-202

Description

C-C motif chemokine receptor 6 [Source:VGNC Symbol;Acc:VGNC:26986]

Location

Primary_assembly 9: 101,922,741-101,927,715 forward strand.

About this transcript

This transcript has 3 exons, is annotated with 53 domains and features, is associated with 837 variant alleles and maps to 12 oligo probes.

Gene

This transcript is a product of gene ENSBTAG00000014496.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000134893.2	CCR6-201	3510	436aa	ENSBTAP00000083230.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SKS5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000097315.2	CCR6-203	3578	412aa	ENSBTAP00000093127.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TAU3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000037034.7	CCR6-202	3565	375aa	ENSBTAP00000036877.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MT56	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 3,565 bps, Translation length: 375 residues

Version

ENSBTAT00000037034.7

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Upcoming Ensembl Platform Transition

Transcript: ENSBTAT00000037034.7 CCR6-202

Summary

About Us

Get help

Our sister sites

Follow us

Upcoming Ensembl Platform Transition

Favourite species

All species

Recent locations

Transcript: ENSBTAT00000037034.7 CCR6-202

Summary

About Us

Get help

Our sister sites

Follow us