Transcript: ENSBTAT00000035014.5 MEF2C-203

Description

myocyte enhancer factor 2C [Source:VGNC Symbol;Acc:VGNC:31373]

Location

Primary_assembly 7: 88,250,061-88,403,355 reverse strand.

About this transcript

This transcript has 10 exons, is annotated with 23 domains and features, is associated with 5072 variant alleles and maps to 5 oligo probes.

Gene

This transcript is a product of gene ENSBTAG00000020701.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000102406.1	MEF2C-205	1905	483aa	ENSBTAP00000088229.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SSC0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000086206.2	MEF2C-201	2805	473aa	ENSBTAP00000067144.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAF7ADI2	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSBTAT00000067432.2	MEF2C-202	2799	471aa	ENSBTAP00000069330.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MEB0	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSBTAT00000035014.5	MEF2C-203	2781	465aa	ENSBTAP00000034894.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G3MW05	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSBTAT00000080070.2	MEF2C-204	2637	417aa	ENSBTAP00000066884.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MDH8	-

Summary

Statistics

Exons: 10, Coding exons: 9, Transcript length: 2,781 bps, Translation length: 465 residues

Version

ENSBTAT00000035014.5

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

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Transcript: ENSBTAT00000035014.5 MEF2C-203

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Transcript: ENSBTAT00000035014.5 MEF2C-203

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