Transcript: ENSBTAT00000027864.7 CAST-202

Description

calpastatin [Source:VGNC Symbol;Acc:VGNC:26790]

Location

Primary_assembly 7: 96,034,562-96,160,207 forward strand.

About this transcript

This transcript has 29 exons, is annotated with 31 domains and features and is associated with 6974 variant alleles.

Gene

This transcript is a product of gene ENSBTAG00000000874.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000027864.7	CAST-202	2672	837aa	ENSBTAP00000027864.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MD74	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000011029.6	CAST-207	4550	786aa	ENSBTAP00000011029.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1N161	-
ENSBTAT00000076275.2	CAST-206	4511	773aa	ENSBTAP00000058259.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LT32	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000067827.2	CAST-201	4493	777aa	ENSBTAP00000061529.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MZC5	-
ENSBTAT00000071010.2	CAST-205	4484	764aa	ENSBTAP00000058598.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LI46	-
ENSBTAT00000065978.3	CAST-204	4454	754aa	ENSBTAP00000056154.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G3N2N7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000110447.1	CAST-209	4426	741aa	ENSBTAP00000086507.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000037077.6	CAST-208	4407	781aa	ENSBTAP00000036917.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MR96	-
ENSBTAT00000087389.2	CAST-203	4200	712aa	ENSBTAP00000065716.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M6S3	-
ENSBTAT00000079894.2	CAST-210	3910	704aa	ENSBTAP00000057302.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LLB2	-

Summary

Statistics

Exons: 29, Coding exons: 29, Transcript length: 2,672 bps, Translation length: 837 residues

Version

ENSBTAT00000027864.7

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSBTAT00000027864.7 CAST-202

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Transcript: ENSBTAT00000027864.7 CAST-202

Summary

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