Transcript: ENSBTAT00000025850.7 CFAP100-203

Description

cilia and flagella associated protein 100 [Source:VGNC Symbol;Acc:VGNC:27236]

Location

Primary_assembly 22: 60,650,705-60,677,471 forward strand.

About this transcript

This transcript has 18 exons, is annotated with 21 domains and features, is associated with 3835 variant alleles and maps to 12 oligo probes.

Gene

This transcript is a product of gene ENSBTAG00000019402.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000082972.3	CFAP100-202	2291	680aa	ENSBTAP00000057973.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LMM7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000079364.3	CFAP100-201	2266	588aa	ENSBTAP00000067945.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MG30	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000115134.1	CFAP100-204	2255	653aa	ENSBTAP00000080487.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9S5K4	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000025850.7	CFAP100-203	2240	663aa	ENSBTAP00000025850.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAF6DM36	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 18, Coding exons: 17, Transcript length: 2,240 bps, Translation length: 663 residues

Version

ENSBTAT00000025850.7

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Upcoming Ensembl Platform Transition

Transcript: ENSBTAT00000025850.7 CFAP100-203

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Transcript: ENSBTAT00000025850.7 CFAP100-203

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