Transcript: ENSBTAT00000025279.6 ITGB7-203

Description

integrin subunit beta 7 [Source:VGNC Symbol;Acc:VGNC:30332]

Location

Primary_assembly 5: 26,796,540-26,811,772 forward strand.

About this transcript

This transcript has 15 exons, is annotated with 48 domains and features and is associated with 2094 variant alleles.

Gene

This transcript is a product of gene ENSBTAG00000018993.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000025279.6	ITGB7-203	3007	873aa	ENSBTAP00000025279.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6RKH9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000114265.1	ITGB7-202	3063	812aa	ENSBTAP00000086864.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000077744.2	ITGB7-201	2947	853aa	ENSBTAP00000070196.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A7YWN9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000136045.1	ITGB7-204	2167	652aa	ENSBTAP00000075183.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 15, Coding exons: 15, Transcript length: 3,007 bps, Translation length: 873 residues

Version

ENSBTAT00000025279.6

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSBTAT00000025279.6 ITGB7-203

Summary

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Transcript: ENSBTAT00000025279.6 ITGB7-203

Summary

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