Transcript: ENSBTAT00000024262.7 NFIX-207

Description

nuclear factor I X [Source:VGNC Symbol;Acc:VGNC:32042]

Location

Primary_assembly 7: 12,486,828-12,549,899 reverse strand.

About this transcript

This transcript has 11 exons, is annotated with 16 domains and features and is associated with 3919 variant alleles.

Gene

This transcript is a product of gene ENSBTAG00000018229.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000073398.2	NFIX-202	2534	510aa	ENSBTAP00000074090.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MIF8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000119638.1	NFIX-203	2806	494aa	ENSBTAP00000088969.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SY16	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSBTAT00000099550.1	NFIX-204	2709	502aa	ENSBTAP00000084088.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SD92	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000098660.1	NFIX-205	2586	461aa	ENSBTAP00000075867.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9RXE3	-
ENSBTAT00000069807.2	NFIX-201	2183	393aa	ENSBTAP00000067900.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MB65	-
ENSBTAT00000024262.7	NFIX-207	1644	433aa	ENSBTAP00000024262.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	W8QEC7	-
ENSBTAT00000075131.2	NFIX-206	1488	458aa	ENSBTAP00000070769.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MJ33	-
ENSBTAT00000126296.1	NFIX-208	788	179aa	ENSBTAP00000093266.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9T3A1	-

Summary

Statistics

Exons: 11, Coding exons: 9, Transcript length: 1,644 bps, Translation length: 433 residues

Version

ENSBTAT00000024262.7

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSBTAT00000024262.7 NFIX-207

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSBTAT00000024262.7 NFIX-207

Summary

About Us

Get help

Our sister sites

Follow us