Transcript: ENSBTAT00000023522.7 JUP-201

Description

junction plakoglobin [Source:VGNC Symbol;Acc:VGNC:30388]

Location

About this transcript

This transcript has 17 exons, is annotated with 41 domains and features, is associated with 2355 variant alleles and maps to 12 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000023522.7	JUP-201	3261	745aa	ENSBTAP00000023522.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8SPJ1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSBTAT00000076239.2	JUP-202	2435	741aa	ENSBTAP00000063856.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M1M7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 17, Coding exons: 13, Transcript length: 3,261 bps, Translation length: 745 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8SPJ1

Version

ENSBTAT00000023522.7

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.