Transcript: ENSBTAT00000019464.5 SEPSECS-201

Description

Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase [Source:VGNC Symbol;Acc:VGNC:107250]

Location

About this transcript

This transcript has 12 exons, is annotated with 8 domains and features and is associated with 1835 variant alleles.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000019464.5	SEPSECS-201	2961	586aa	ENSBTAP00000019464.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BPY3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000103878.1	SEPSECS-202	2751	516aa	ENSBTAP00000075074.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 12, Coding exons: 11, Transcript length: 2,961 bps, Translation length: 586 residues

Version

ENSBTAT00000019464.5

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.