Transcript: ENSBTAT00000017505.6 COL2A1-201

Description

collagen type II alpha 1 chain [Source:VGNC Symbol;Acc:VGNC:27564]

Location

About this transcript

This transcript has 54 exons, is annotated with 80 domains and features, is associated with 4086 variant alleles and maps to 29 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000017505.6	COL2A1-201	4924	1487aa	ENSBTAP00000017505.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P02459	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000107158.1	COL2A1-203	4824	1396aa	ENSBTAP00000092204.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9T0B9	-
ENSBTAT00000130023.1	COL2A1-202	4717	1418aa	ENSBTAP00000092672.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9T7E0	-

Summary

Statistics

Exons: 54, Coding exons: 54, Transcript length: 4,924 bps, Translation length: 1,487 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P02459

Version

ENSBTAT00000017505.6

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.