Transcript: ENSBTAT00000017168.6 MMP15-201

Description

matrix metallopeptidase 15 [Source:VGNC Symbol;Acc:VGNC:31520]

Location

About this transcript

This transcript has 10 exons, is annotated with 54 domains and features, is associated with 2419 variant alleles and maps to 1 oligo probe.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000017168.6	MMP15-201	3598	675aa	ENSBTAP00000017168.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MHG1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000076510.2	MMP15-202	3585	626aa	ENSBTAP00000071021.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MID0	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 3,598 bps, Translation length: 675 residues

Version

ENSBTAT00000017168.6

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.