Transcript: ENSBTAT00000015786.7 SRGAP1-201

Description

SLIT-ROBO Rho GTPase activating protein 1 [Source:VGNC Symbol;Acc:VGNC:35278]

Location

About this transcript

This transcript has 22 exons, is annotated with 36 domains and features, is associated with 10978 variant alleles and maps to 23 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000015786.7	SRGAP1-201	3545	1085aa	ENSBTAP00000015786.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MFS4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000072463.2	SRGAP1-202	3476	1062aa	ENSBTAP00000071878.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MCM9	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

Summary

Statistics

Exons: 22, Coding exons: 22, Transcript length: 3,545 bps, Translation length: 1,085 residues

Version

ENSBTAT00000015786.7

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.