Transcript: ENSBTAT00000014515.7 CBFA2T3-201

Description

CBFA2/RUNX1 partner transcriptional co-repressor 3 [Source:VGNC Symbol;Acc:VGNC:80260]

Location

Primary_assembly 18: 14,050,587-14,101,973 reverse strand.

About this transcript

This transcript has 12 exons, is annotated with 35 domains and features, is associated with 5061 variant alleles and maps to 24 oligo probes.

Gene

This transcript is a product of gene ENSBTAG00000010927.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000083635.2	CBFA2T3-202	3096	631aa	ENSBTAP00000065834.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LYI7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000014515.7	CBFA2T3-201	3195	593aa	ENSBTAP00000014515.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1N1Y8	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000084816.2	CBFA2T3-203	3018	605aa	ENSBTAP00000060910.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LUS1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 12, Coding exons: 11, Transcript length: 3,195 bps, Translation length: 593 residues

Version

ENSBTAT00000014515.7

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

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Transcript: ENSBTAT00000014515.7 CBFA2T3-201

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Transcript: ENSBTAT00000014515.7 CBFA2T3-201

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