Transcript: ENSBTAT00000012991.8 CACNA1H-202

Description

calcium voltage-gated channel subunit alpha1 H [Source:VGNC Symbol;Acc:VGNC:26678]

Location

About this transcript

This transcript has 33 exons, is annotated with 133 domains and features, is associated with 4175 variant alleles and maps to 48 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000012991.8	CACNA1H-202	7489	2242aa	ENSBTAP00000012991.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MQV2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000077467.3	CACNA1H-201	7681	2240aa	ENSBTAP00000068201.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1NAD2	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

Summary

Statistics

Exons: 33, Coding exons: 33, Transcript length: 7,489 bps, Translation length: 2,242 residues

Version

ENSBTAT00000012991.8

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.