Transcript: ENSBTAT00000012908.8 GTF2IRD2-204

Description

GTF2I repeat domain containing 2 [Source:NCBI gene (formerly Entrezgene);Acc:539745]

Location

Primary_assembly 25: 32,703,798-32,750,371 forward strand.

About this transcript

This transcript has 15 exons, is annotated with 13 domains and features, is associated with 2881 variant alleles and maps to 12 oligo probes.

Gene

This transcript is a product of gene ENSBTAG00000026286.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000098699.2	GTF2IRD2-201	3544	950aa	ENSBTAP00000083869.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4IFA3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000103984.2	GTF2IRD2-202	3481	929aa	ENSBTAP00000092774.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9T1U5	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSBTAT00000089698.2	GTF2IRD2-203	3466	924aa	ENSBTAP00000095438.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TEN8	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000012908.8	GTF2IRD2-204	3112	916aa	ENSBTAP00000012908.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAF6YU58	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 15, Coding exons: 14, Transcript length: 3,112 bps, Translation length: 916 residues

Version

ENSBTAT00000012908.8

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Upcoming Ensembl Platform Transition

Transcript: ENSBTAT00000012908.8 GTF2IRD2-204

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Transcript: ENSBTAT00000012908.8 GTF2IRD2-204

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