Transcript: ENSBTAT00000011447.5 LDHA-201

Description

lactate dehydrogenase A [Source:NCBI gene (formerly Entrezgene);Acc:281274]

Location

Primary_assembly 29: 26,290,893-26,298,545 reverse strand.

About this transcript

This transcript has 8 exons, is annotated with 21 domains and features, is associated with 815 variant alleles and maps to 12 oligo probes.

Gene

This transcript is a product of gene ENSBTAG00000008683.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000114292.1	LDHA-202	2282	490aa	ENSBTAP00000082552.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SB13	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000115709.1	LDHA-203	2126	438aa	ENSBTAP00000093153.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9T2Y5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000011447.5	LDHA-201	1895	361aa	ENSBTAP00000011447.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAF6YSZ5	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000056276.4	LDHA-204	1582	274aa	ENSBTAP00000047729.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAF6ZIG8	-
ENSBTAT00000090905.1	LDHA-205	888	241aa	ENSBTAP00000099550.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TST1	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 1,895 bps, Translation length: 361 residues

Version

ENSBTAT00000011447.5

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

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Transcript: ENSBTAT00000011447.5 LDHA-201

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Transcript: ENSBTAT00000011447.5 LDHA-201

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