Transcript: ENSBTAT00000010838.5 S100A7-202

Description

S100 calcium binding protein A7 [Source:NCBI gene (formerly Entrezgene);Acc:282344]

Location

About this transcript

This transcript has 3 exons, is annotated with 14 domains and features, is associated with 575 variant alleles and maps to 12 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000046857.5	S100A7-201	859	171aa	ENSBTAP00000044105.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BKA1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000010838.5	S100A7-202	415	101aa	ENSBTAP00000010838.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q8WRY3 Q28050	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 415 bps, Translation length: 101 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q28050

Version

ENSBTAT00000010838.5

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.