Transcript: ENSBTAT00000008678.8 PTPN1-202

Description

protein tyrosine phosphatase non-receptor type 1 [Source:VGNC Symbol;Acc:VGNC:33529]

Location

About this transcript

This transcript has 9 exons, is annotated with 29 domains and features, is associated with 3905 variant alleles and maps to 24 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000125559.2	PTPN1-201	1472	429aa	ENSBTAP00000097440.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TFV5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000122356.2	PTPN1-203	4715	404aa	ENSBTAP00000099296.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TQK7	-
ENSBTAT00000008678.8	PTPN1-202	4643	425aa	ENSBTAP00000008678.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6QQN2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 4,643 bps, Translation length: 425 residues

Version

ENSBTAT00000008678.8

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.