Transcript: ENSBTAT00000008225.5 HSP90AA1-201

Description

heat shock protein 90 alpha family class A member 1 [Source:VGNC Symbol;Acc:VGNC:53940]

Location

About this transcript

This transcript has 11 exons, is annotated with 33 domains and features, is associated with 1044 variant alleles and maps to 24 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000008225.5	HSP90AA1-201	2896	734aa	ENSBTAP00000008225.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A452DI85	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSBTAT00000079542.2	HSP90AA1-202	2896	734aa	ENSBTAP00000069367.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAF7AHH4	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 2,896 bps, Translation length: 734 residues

Version

ENSBTAT00000008225.5

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.