Transcript: ENSBTAT00000007391.6 LITAF-203

Description

lipopolysaccharide induced TNF factor [Source:VGNC Symbol;Acc:VGNC:30911]

Location

About this transcript

This transcript has 4 exons, is annotated with 8 domains and features and is associated with 1983 variant alleles.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000078843.2	LITAF-205	1975	191aa	ENSBTAP00000060995.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LZ76	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000131910.1	LITAF-206	2125	183aa	ENSBTAP00000095536.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000135376.1	LITAF-204	2061	169aa	ENSBTAP00000076887.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LLV1	-
ENSBTAT00000125058.1	LITAF-202	2000	179aa	ENSBTAP00000096651.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000131077.1	LITAF-201	1987	187aa	ENSBTAP00000074986.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000007391.6	LITAF-203	1903	161aa	ENSBTAP00000007391.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8J8XMU6 Q2KHV3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 1,903 bps, Translation length: 161 residues

Version

ENSBTAT00000007391.6

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.