Transcript: ENSBTAT00000006081.5 PLEKHA1-201

Description

pleckstrin homology domain containing A1 [Source:VGNC Symbol;Acc:VGNC:33003]

Location

About this transcript

This transcript has 13 exons, is annotated with 17 domains and features and is associated with 2102 variant alleles.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000071954.2	PLEKHA1-202	2342	404aa	ENSBTAP00000065924.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M7A3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSBTAT00000006081.5	PLEKHA1-201	2309	393aa	ENSBTAP00000006081.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q0IIA5	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

Summary

Statistics

Exons: 13, Coding exons: 12, Transcript length: 2,309 bps, Translation length: 393 residues

Version

ENSBTAT00000006081.5

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.