Transcript: ENSBTAT00000005753.6 SOCS1-203

Description

suppressor of cytokine signaling 1 [Source:VGNC Symbol;Acc:VGNC:35119]

Location

Primary_assembly 25: 9,912,564-9,914,969 reverse strand.

About this transcript

This transcript has 2 exons, is annotated with 18 domains and features, is associated with 885 variant alleles and maps to 12 oligo probes.

Gene

This transcript is a product of gene ENSBTAG00000004386.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000093580.1	SOCS1-202	2691	223aa	ENSBTAP00000093731.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MSN0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000132113.1	SOCS1-201	2469	223aa	ENSBTAP00000079967.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MSN0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000005753.6	SOCS1-203	1240	223aa	ENSBTAP00000005753.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MSN0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 1,240 bps, Translation length: 223 residues

Version

ENSBTAT00000005753.6

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Upcoming Ensembl Platform Transition

Transcript: ENSBTAT00000005753.6 SOCS1-203

Summary

About Us

Get help

Our sister sites

Follow us

Upcoming Ensembl Platform Transition

Favourite species

All species

Recent locations

Transcript: ENSBTAT00000005753.6 SOCS1-203

Summary

About Us

Get help

Our sister sites

Follow us