Transcript: ENSBTAT00000005002.7 RSPO1-201

Description

R-spondin 1 [Source:VGNC Symbol;Acc:VGNC:34188]

Location

About this transcript

This transcript has 5 exons, is annotated with 14 domains and features and is associated with 1542 variant alleles.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000078037.2	RSPO1-202	2860	436aa	ENSBTAP00000065738.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1ME23	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000005002.7	RSPO1-201	1148	199aa	ENSBTAP00000005002.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1ME23	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 1,148 bps, Translation length: 199 residues

Version

ENSBTAT00000005002.7

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.