Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

Configure this page

Custom tracks

Share this page

Bookmark this page

.

Transcript: ENSBTAT00000015934.7 CDX1-201

.

Description

caudal type homeobox 1 [Source:VGNC Symbol;Acc:VGNC:106683]

Location

Primary_assembly 7: 61,521,972-61,539,125 forward strand.

About this transcript

This transcript has 3 exons, is annotated with 29 domains and features and is associated with 1383 variant alleles.

Gene

This transcript is a product of gene ENSBTAG00000012014.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000015934.7	CDX1-201	1682	265aa	ENSBTAP00000015934.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6QLL3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

.

Protein summary

.

Protein domains for ENSBTAP00000015934.6

.