Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
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Transcript: ENSBTAT00000006224.6 RUNX1-202

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Description

RUNX family transcription factor 1 [Source:VGNC Symbol;Acc:VGNC:49959]

Location

Primary_assembly 1: 146,974,504-147,244,723 reverse strand.

About this transcript

This transcript has 9 exons, is annotated with 30 domains and features and is associated with 10321 variant alleles.

Gene

This transcript is a product of gene ENSBTAG00000004742.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000006224.6	RUNX1-202	2665	480aa	ENSBTAP00000006224.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BAD4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000072102.2	RUNX1-203	2880	468aa	ENSBTAP00000058804.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LIF4	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000072096.2	RUNX1-201	2457	389aa	ENSBTAP00000064303.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1N3V9	-

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Protein summary

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Protein domains for ENSBTAP00000006224.5

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