Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: ENSBTAT00000006039.7 PITX1-202

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Description

paired like homeodomain 1 [Source:VGNC Symbol;Acc:VGNC:32924]

Location

Primary_assembly 7: 46,474,414-46,486,490 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 26 domains and features, is associated with 1143 variant alleles and maps to 23 oligo probes.

Gene

This transcript is a product of gene ENSBTAG00000004602.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000100099.1	PITX1-201	2285	355aa	ENSBTAP00000092297.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9T6E0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000006039.7	PITX1-202	2271	314aa	ENSBTAP00000006039.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MU46	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

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Protein summary

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Protein domains for ENSBTAP00000006039.5

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