Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: SLC17A5 ENSBTAG00000044053

.

Description

solute carrier family 17 member 5 [Source:VGNC Symbol;Acc:VGNC:34700]

Location

Primary_assembly 9: 13,086,269-13,162,393 reverse strand.

ARS-UCD1.3:CM008176.2

About this gene

This gene has 6 transcripts (splice variants), 338 orthologues and 12 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000114221.1	SLC17A5-205	2553	602aa	ENSBTAP00000103441.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000113411.1	SLC17A5-203	2497	550aa	ENSBTAP00000084826.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000102377.1	SLC17A5-202	2452	507aa	ENSBTAP00000095166.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000101413.1	SLC17A5-204	2353	502aa	ENSBTAP00000091497.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSBTAT00000116363.1	SLC17A5-206	2313	514aa	ENSBTAP00000075946.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000061225.3	SLC17A5-201	2242	495aa	ENSBTAP00000053184.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1B7R3	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

.

Summary

.

.