Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SHOC1 ENSBTAG00000044004

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Description

shortage in chiasmata 1 [Source:VGNC Symbol;Acc:VGNC:52743]

Gene Synonyms

C8H9ORF84

Location

Primary_assembly 8: 101,093,292-101,180,821 reverse strand.

ARS-UCD1.3:CM008175.2

About this gene

This gene has 2 transcripts (splice variants) and 135 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000087036.2	SHOC1-201	5047	1546aa	ENSBTAP00000073375.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MPI5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000061241.4	SHOC1-202	1600	484aa	ENSBTAP00000053472.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MMQ3	-

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Summary

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