Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Cellular component
- GO: Molecular function
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: COL21A1 ENSBTAG00000033515

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Description

collagen type XXI alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:17025]

Location

Primary_assembly 23: 4,026,788-4,261,679 forward strand.

ARS-UCD1.3:CM008190.2

About this gene

This gene has 3 transcripts (splice variants), 111 orthologues and 38 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000036339.6	COL21A1-203	3938	921aa	ENSBTAP00000036200.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BHG5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000074238.2	COL21A1-201	2115	518aa	ENSBTAP00000071931.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MQC5 A6QPA4	-
ENSBTAT00000001189.7	COL21A1-202	2073	504aa	ENSBTAP00000001189.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BGN5	-

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Summary

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