Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: P4HA1 ENSBTAG00000032996

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Description

prolyl 4-hydroxylase subunit alpha 1 [Source:VGNC Symbol;Acc:VGNC:32535]

Location

Primary_assembly 28: 29,067,217-29,167,290 reverse strand.

ARS-UCD1.3:CM008195.2

About this gene

This gene has 5 transcripts (splice variants), 205 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000056188.4	P4HA1-203	2621	534aa	ENSBTAP00000048870.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1RMU3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSBTAT00000046841.5	P4HA1-201	2566	534aa	ENSBTAP00000044089.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6QL77	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSBTAT00000099656.1	P4HA1-202	2512	516aa	ENSBTAP00000085388.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000096132.1	P4HA1-205	2330	519aa	ENSBTAP00000092189.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000070960.2	P4HA1-204	1657	494aa	ENSBTAP00000058756.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6QL77	-

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Summary

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