Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: TTC7A ENSBTAG00000032558

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Description

tetratricopeptide repeat domain 7A [Source:VGNC Symbol;Acc:VGNC:36480]

Location

Primary_assembly 11: 29,405,121-29,525,964 forward strand.

ARS-UCD1.3:CM008178.2

About this gene

This gene has 9 transcripts (splice variants), 203 orthologues and 14 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000117241.1	TTC7A-208	3171	882aa	ENSBTAP00000085590.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000102505.1	TTC7A-204	3491	803aa	ENSBTAP00000100207.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000093222.1	TTC7A-205	3244	812aa	ENSBTAP00000101580.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000101779.1	TTC7A-203	3111	810aa	ENSBTAP00000100480.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000071008.2	TTC7A-209	3099	825aa	ENSBTAP00000072982.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MSG0	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000046196.4	TTC7A-206	2982	806aa	ENSBTAP00000043517.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BDL2	-
ENSBTAT00000121678.1	TTC7A-207	2964	813aa	ENSBTAP00000093868.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000107099.1	TTC7A-201	1318	226aa	ENSBTAP00000086109.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000086629.2	TTC7A-202	784	219aa	ENSBTAP00000069767.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M7H5	-

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Summary

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