Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: EFCAB6 ENSBTAG00000030189

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Description

EF-hand calcium binding domain 6 [Source:VGNC Symbol;Acc:VGNC:28346]

Location

Primary_assembly 5: 114,257,682-114,511,543 reverse strand.

ARS-UCD2.0:CM008172.2

About this gene

This gene has 4 transcripts (splice variants), 140 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000010796.8	EFCAB6-201	5121	1497aa	ENSBTAP00000010796.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G5E5A3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000089700.2	EFCAB6-202	5072	1497aa	ENSBTAP00000082954.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SGY2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000042597.6	EFCAB6-203	1766	362aa	ENSBTAP00000040233.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G3X7P6	-
ENSBTAT00000134071.1	EFCAB6-204	603	200aa	ENSBTAP00000090240.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9T3G9	-

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Summary

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