Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: HPGD ENSBTAG00000025942

.

Description

15-hydroxyprostaglandin dehydrogenase [Source:VGNC Symbol;Acc:VGNC:56973]

Location

Primary_assembly 8: 6,787,675-6,824,508 reverse strand.

ARS-UCD2.0:CM008175.2

About this gene

This gene has 4 transcripts (splice variants) and 206 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000027024.4	HPGD-201	2415	266aa	ENSBTAP00000027024.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q309F3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000103248.1	HPGD-202	2211	198aa	ENSBTAP00000088876.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SXE0	-
ENSBTAT00000099989.1	HPGD-203	564	179aa	ENSBTAP00000088205.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SVI7	-
ENSBTAT00000132824.1	HPGD-204	459	143aa	ENSBTAP00000088875.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SU67	-

.

Summary

.

.