Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: CALM1 ENSBTAG00000025644

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Description

calmodulin 1 [Source:NCBI gene (formerly Entrezgene);Acc:617095]

Location

Primary_assembly 10: 102,005,661-102,016,062 forward strand.

ARS-UCD2.0:CM008177.2

About this gene

This gene has 5 transcripts (splice variants), 150 orthologues and 21 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000134382.2	CALM1-205	3580	186aa	ENSBTAP00000080084.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9S2E8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000036194.7	CALM1-202	3611	149aa	ENSBTAP00000036057.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M6C6 P62157	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSBTAT00000075756.3	CALM1-203	3472	150aa	ENSBTAP00000069277.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M6C6	-
ENSBTAT00000152640.1	CALM1-204	922	177aa	ENSBTAP00000104185.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000083507.3	CALM1-201	761	150aa	ENSBTAP00000058610.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAF6ZWW2	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

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Summary

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